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Comprehensive Guide to Fixing vSAN Cluster Partition Problems in Dell EMC VxRail

Introduction

vSAN cluster partition issues in VxRail environments can severely impact your virtualized infrastructure, leading to data unavailability and potential VM downtime. A cluster partition occurs when ESXi hosts within your VxRail cluster lose network communication with each other, splitting the cluster into isolated sub-groups. This comprehensive guide will walk you through identifying, troubleshooting, and resolving vSAN cluster partition issues in Dell EMC VxRail systems.

Understanding vSAN Cluster Partitions

A vSAN cluster partition happens when hosts in your VxRail cluster cannot communicate properly over the vSAN network. Instead of functioning as a unified cluster, the system splits into multiple network partitions where hosts within each partition can communicate with each other but not with hosts in other partitions. This fragmentation can render vSAN objects unavailable and compromise your storage infrastructure’s reliability.

Common Symptoms of vSAN Cluster Partition

Before diving into resolution steps, identify if you’re experiencing a cluster partition by looking for these symptoms:

  • vSAN cluster partition alarm displayed in vSphere Client or Skyline Health
  • Network partition warning in vSAN Health Service showing multiple partitions detected
  • Nodes showing as “network partitioned” despite successful ping tests via vmkping
  • Sub-Cluster Member Count showing 1 when running esxcli vsan cluster get on individual hosts
  • vSAN network configuration status indicating “network misconfiguration detected”
  • Empty output when running esxcli vsan network list command
  • ESXi UI showing vSAN traffic disabled for vmk3 (or your designated vSAN VMkernel adapter)

Root Causes of vSAN Cluster Partitions in VxRail

Understanding the underlying causes helps prevent future occurrences:

1. VMkernel Adapter Misconfiguration

The most common cause in VxRail environments is the vSAN VMkernel adapter (typically vmk3) becoming untagged for vSAN traffic, especially after cluster shutdown and restart operations.

2. Invalid or Incomplete Unicast Agent List

In unicast mode deployments, an incorrect unicast agent list can cause hosts to be unable to discover other cluster members.

3. Network Configuration Issues

  • Mismatched subnets across ESXi hosts
  • VLAN configuration errors
  • Incorrect MTU settings
  • Physical network connectivity problems

4. Network Overload and Packet Loss

Excessive dropped packets due to network congestion can trigger partition detection, even when physical connectivity exists.

5. ESXi Version Mismatch

Different ESXi versions running on vSAN nodes can cause compatibility issues leading to partitions.

Step-by-Step Resolution Guide

Method 1: Resolving VMkernel Adapter Issues (Most Common)

This is the primary solution for VxRail clusters experiencing partitions after power events.

Step 1: Verify vSAN Network Configuration

Connect to each ESXi host via SSH and run:

esxcli vsan network list

If the output is empty, vmk3 is not tagged for vSAN traffic.

Step 2: Check Cluster Status

Run the following command on each host:

esxcli vsan cluster get

Look for the “Sub-Cluster Member Count” field. If it shows “1” on each host, they’re all in separate partitions.

Step 3: Re-tag VMkernel Adapter for vSAN Traffic

On each affected node, execute:

esxcli vsan network ip add -i vmk3

Replace vmk3 with your actual vSAN VMkernel adapter name if different.

Step 4: Verify Resolution

After tagging all hosts, verify the configuration:

esxcli vsan network list

You should now see vmk3 listed with the correct IP address. Check cluster membership:

esxcli vsan cluster get

The “Sub-Cluster Member Count” should now reflect the total number of hosts in your cluster.

Method 2: Fixing Unicast Agent List Issues

If your VxRail cluster uses unicast mode and hosts can ping each other but remain partitioned, the unicast agent list may be corrupted.

Step 1: Enable Ignore Cluster Member List Updates

On all hosts, run:

esxcfg-advcfg -s 1 /VSAN/IgnoreClusterMemberListUpdates

This prevents the incorrect list from being propagated during the fix.

Step 2: Verify Current Unicast Agent List

Check the existing unicast agent list:

 esxcli vsan cluster unicastagent list

Step 3: Rebuild the Unicast Agent List

Remove all existing entries and add the correct ones. For each host in the cluster:

 esxcli vsan cluster unicastagent remove -u esxcli vsan cluster unicastagent add -u -U -p 12321

Step 4: Restore Default Settings

Once all hosts have the correct unicast agent list:

esxcfg-advcfg -s 0 /VSAN/IgnoreClusterMemberListUpdates

Method 3: Network Connectivity Troubleshooting

Step 1: Verify VMkernel Network Configuration

List all VMkernel adapters:

esxcfg-vmknic -l | grep vmk3

Ensure the vSAN VMkernel adapter has the correct IP address, subnet mask, and VLAN configuration.

Step 2: Test Network Connectivity

Perform ping tests from each host to all other hosts using the vSAN VMkernel adapter:

vmkping -I vmk3

Step 3: Check for Packet Loss

Use esxtop to monitor dropped packets:

esxtop

Press ‘n’ for network view and examine the %DRPRX field for excessive dropped packets.

Step 4: Verify MTU Settings

Test jumbo frames if configured:

vmkping -I vmk3 -s 8972 -d

Method 4: Using vSAN Health Service for Diagnosis

Step 1: Access vSAN Health Service

In vSphere Client, navigate to:

  • Cluster → Monitor → vSAN → Health

Step 2: Review Network Health Checks

Examine these specific health checks:

  • Network Health – vSAN Cluster Partition
  • Network Health – All hosts have a vSAN vmknic configured
  • Network Health – Hosts small ping test (connectivity check)
  • Network Health – Hosts large ping test (MTU check)

Step 3: Check vSAN Disk Management View

Navigate to vSAN Disk Management and examine the “Network Partition Group” column to identify which hosts are in which partition.

Step 4: Address Identified Issues

Follow the recommendations provided by each failed health check to resolve underlying problems.

Prevention Best Practices

1. Implement Proper Shutdown Procedures

Always follow Dell EMC’s recommended shutdown and startup procedures for VxRail clusters to prevent VMkernel adapter configuration loss.

2. Regular Health Monitoring

  • Enable vSAN Health Service and review it regularly
  • Configure vSAN Skyline Health for proactive monitoring
  • Set up alerts for network partition detection

3. Network Infrastructure Maintenance

  • Ensure redundant network paths are properly configured
  • Regularly update switch firmware
  • Monitor network utilization to prevent congestion

4. Configuration Management

  • Document your vSAN network configuration
  • Use configuration backup and restore procedures
  • Maintain consistent ESXi versions across all hosts

5. Validate After Maintenance

After any maintenance activity, verify:

  • vSAN network configuration is intact
  • All hosts show in a single partition
  • Health checks pass successfully

Troubleshooting Tips

If Hosts Can Ping But Remain Partitioned

This typically indicates a unicast agent list issue or VMkernel adapter misconfiguration rather than physical network problems. Focus on Methods 1 and 2 above.

If Only One Host is Partitioned

Isolate troubleshooting to that specific host:

  • Check physical network connections
  • Verify switch port configuration
  • Review host-specific VMkernel settings
  • Check for host-level firewall rules blocking vSAN traffic

If Partition Occurs After Firmware Updates

  • Verify all hosts completed the update successfully
  • Check for ESXi version compatibility
  • Review update logs for errors
  • Consider rolling back if issues persist

Verification and Validation

After implementing any resolution, perform these validation steps:

  1. Verify Single Partition: All hosts should show the same Sub-Cluster UUID and the total member count
  2. Check vSAN Health: All network health checks should pass
  3. Test VM Operations: Create a test VM and verify storage operations work correctly
  4. Monitor for Stability: Observe the cluster for 24-48 hours to ensure the partition doesn’t recur

When to Contact Support

Contact Dell EMC Support if:

  • Partition issues persist after following all resolution steps
  • Physical network infrastructure problems are suspected
  • Multiple health checks fail simultaneously
  • Data unavailability or VM downtime occurs
  • You’re unsure about making configuration changes in production

Conclusion

vSAN cluster partition issues in VxRail environments are typically caused by VMkernel adapter misconfiguration, especially after power events, or unicast agent list corruption. By following this systematic troubleshooting approach, you can quickly identify and resolve partition issues, restoring your VxRail cluster to full operational status. Regular monitoring and adherence to best practices will help prevent future occurrences and maintain a stable, high-performance vSAN infrastructure.

Remember to always test resolution procedures in a non-production environment when possible and maintain current backups before making configuration changes. With proper understanding and proactive management, you can minimize the impact of vSAN cluster partition issues on your VxRail infrastructure.


Keywords: vSAN cluster partition, VxRail troubleshooting, VMkernel adapter configuration, vSAN network partition, Dell EMC VxRail, ESXi cluster partition, vSAN health service, unicast agent list, vmk3 configuration, VxRail cluster issues

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